WebbIf you’re not sure exactly what files you need, check out what files are available before you attempt to download anything. You can do this by querying the Phytozome or IMG endpoints. The section for each endpoint provides instructions for querying that endpoint, along with sample query values you can use as examples. Webb21 mars 2024 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences …
JGI Data Portal - Energy
Webb9 feb. 2024 · A More Intuitive Phytozome Interface Phytozome v13 now hosts upwards of 250 plant genomes and provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on, with a more intuitive interface. WebbTools for exploring the Phytozome collection of green plant genomes. Phytozome v13. Tools for exploring the Phytozome collection of green plant genomes … Contact; Disclaimer; Accessibility / Section 508 Statement ©2016-2024 The Regents … Brachypodium distachyon ABR9 v1. B. distachyonABR9. UNRST BPAN JGI. … formation snacking boulangerie
JGI Data Portal API - Energy
WebbGenome Spinacia oleracea Spov3: Number of files 14: Total file size 371.2 MB WebbThe TDC protein sequence from C. roseus (UniProt: P17770) was used to BLAST search the Phytozome v10 public database and allowed the identification of 11 deduced protein sequences in clementine and 11 sequences in sweet orange genomes, with significant similarity scores to the query sequence (Supplementary Materials Tables S1 and S2). Webb17 juni 2024 · Phytozome is the Plant Comparative Genomics portal of the Department of Energy's Joint Genome Institute. Families of related genes representing the modern descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to clade-specific orthology/paralogy relationships as well as insights … formation snacking cpf